PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00102g00926.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 636aa    MW: 74744.6 Da    PI: 9.0407
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00102g00926.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.42.9e-07429470145
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                               r r T+eE e + ++++++G++ Wk  a ++g  R + ++ + w+
  Peaxi162Scf00102g00926.1 429 RRRYTEEELEMIRKYHREHGPK-WKVLADELG--RHGVHVTDAWR 470
                               6799****************99.********8..88888876666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007173.5203250IPR001005SANT/Myb domain
SuperFamilySSF466892.17E-6204265IPR009057Homeodomain-like
PROSITE profilePS500906.249204248IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.0E-5206257IPR009057Homeodomain-like
PfamPF139212.3E-8207265No hitNo description
PROSITE profilePS500907.631249317IPR017877Myb-like domain
SMARTSM007170.067253319IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.7E-7258318IPR009057Homeodomain-like
PROSITE profilePS500907.085319372IPR017877Myb-like domain
SMARTSM0071743323374IPR001005SANT/Myb domain
SMARTSM007170.026428475IPR001005SANT/Myb domain
PROSITE profilePS500905.993429472IPR017877Myb-like domain
SuperFamilySSF466893.75E-5429485IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-7431483IPR009057Homeodomain-like
PfamPF139211.5E-9433489No hitNo description
PROSITE profilePS500907.863473541IPR017877Myb-like domain
SMARTSM007170.0026477543IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-8484541IPR009057Homeodomain-like
SuperFamilySSF466895.11E-5521605IPR009057Homeodomain-like
PROSITE profilePS500906.934543596IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    Send to blast
MVFGDENMLM MLEKKSKKRK NKDATNVSGA TKGEEKIETK ELRASEDRDF KRKKERGGGK  60
HPGKSSKDNC EDVVKNEVKR KKNEEEAMHD ALLDTNTIAH NSVIGSQENK VFETLSEVSC  120
GNAIDKVKRK KRKTEKRKKE DAQIDILTAV NQGDASTIEE IEDSKTDNAN IRKRKRKKTK  180
LKHNSEDLPH ERSEKRRLFR MGEKRKWTDE EYEMVRKFHG EHGPKWRVLA DELGKHSIHV  240
GNAWQRIKLA NRKKGSWAQE EIQTLFDLVN TDLQLKLHEE KKSKHGMLRD NICWTAISDR  300
LSTRISQHCC NKWYRQLTSP MVATGEWADT DDYRLIDSLF ELDASCIEDV DWDNLLDHRE  360
GELCRKRWNQ MVRQLSKHEN KSFADQVDVL AKRYRPDLEL PTQSKEHPDY TTPLTISQRA  420
PKLFLMGERR RYTEEELEMI RKYHREHGPK WKVLADELGR HGVHVTDAWR RIKLARKKGN  480
WSQEEMQTLF NLVNTDLQLK LHEEKKSKHG MLRDNICWSA ISDRLTTRDN STCCNKWYRQ  540
LTSPMVATGE WADTDDYRLI GTLFELDASC LEDVDWDDLL DHRPGELCRK RWNQMVRQLS  600
HHENKSFAEQ VEVLAKRYRP ELVGAREAWD NKPVVP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127138KRKKRKTEKRKK
2171176RKRKRK
3171177RKRKRKK
4173177RKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793086.11e-137PREDICTED: cyclin-D-binding Myb-like transcription factor 1
TrEMBLA0A0V0INH21e-115A0A0V0INH2_SOLCH; Putative cyclin-D-binding Myb-like transcription factor 1-like
STRINGSolyc08g007300.1.11e-113(Solanum lycopersicum)
STRINGSolyc03g019800.2.11e-112(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10291429
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-81MYB_related family protein